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(Removed FASTA because of non-commercial clause in license: http://faculty.virginia.edu/wrpearson/fasta/COPYRIGHT)
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* [http://staden.sourceforge.net/ Staden package]  - sequence handling and analysis software developed at the Medical Research Council Laboratory of Molecular Biology, Cambridge, UK
* [http://staden.sourceforge.net/ Staden package]  - sequence handling and analysis software developed at the Medical Research Council Laboratory of Molecular Biology, Cambridge, UK
* [http://fasta.bioch.virginia.edu/fasta_www2/fasta_down.shtml fasta2 and fasta3]  - The FASTA programs find regions of local or global (new) similarity between Protein or DNA sequences (not sure how they are licensed)
* [ftp://ftp.ncbi.nih.gov/toolbox/ NCBI-BLAST and other tools]  - The Basic Local Alignment Search Tool (BLAST) finds regions of local similarity between sequences.
* [ftp://ftp.ncbi.nih.gov/toolbox/ NCBI-BLAST and other tools]  - The Basic Local Alignment Search Tool (BLAST) finds regions of local similarity between sequences.


Revision as of 07:14, 6 March 2009

  • Staden package - sequence handling and analysis software developed at the Medical Research Council Laboratory of Molecular Biology, Cambridge, UK
  • NCBI-BLAST and other tools - The Basic Local Alignment Search Tool (BLAST) finds regions of local similarity between sequences.
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